ModFinder: Mapping Post-Translational Modifications (PTMs) in Protein Structures from PDB

Explore how ModFinder identifies post-translational modifications (PTMs) like phosphorylation and glycosylation directly in PDB protein structures. Learn how RCSB PDB integrates PTM annotations and why PTM mapping is critical for structural bioinformatics.

Beyond Multiple Sequence Alignment: Alignment-Free Sequence Analysis & Fast Protein Search with DIAMOND

Multiple Sequence Alignment (MSA) is powerful but not perfect. Explore the major limitations of MSA, the rise of alignment-free sequence analysis methods, and learn how to build and query protein databases using DIAMOND for high-speed bioinformatics workflows.

Data Cleaning: Trimming and Filtering for High-Accuracy Results

High-accuracy results start with clean data. Learn the professional logic behind read trimming, adapter removal, and quality filtering using Trimmomatic.

Bash Scripting: Automating Your Bioinformatics Workflows (Part 2)

Don't waste hours on repetitive tasks. Master Bash scripting to automate file processing, GROMACS simulations, and data organization, making your bioinformatics workflow efficient and reproducible.

NGS Data Wrangling: Understanding FASTQ and Quality Control

Before you analyze, you must check. Learn how to handle raw NGS data, understand the FASTQ format, and run quality control (QC) using the command line.

Conda: Managing Your Bioinformatics Environments

Stop breaking your server! Learn how to use Conda and Mamba to install bioinformatics tools in isolated environments for reproducible research.

Bash Scripting: Automating Your Bioinformatics Workflows

Don't process 100 files manually. Learn how to use Bash scripting and loops to automate GROMACS, RNA-Seq, and file management in the Linux terminal.

Mastering the Command Line: Moving from Windows/Mac to a Linux Remote Server

Stop clicking and start scaling. Learn how to transition from Windows/Mac to a Linux Remote Server for high-performance bioinformatics analysis using SSH and basic CLI commands.

Revolutionizing Healthcare: How Bioinformatics and Nanobiotechnology Are Creating Smarter Nanorobots for Diabetes.

This blog explores how Bioinformatics and Nanobiotechnology can be combined to develop more intelligent nanorobots for the treatment of diseases like Diabetes. This blog further explores the difficulties and opportunities in precision medicine, as well as the potential of nanorobots in other medical applications.